WEKO3
アイテム
農業生物のゲノム情報解析研究
https://maebashi-it.repo.nii.ac.jp/records/80
https://maebashi-it.repo.nii.ac.jp/records/804f943dbc-f33f-4167-aa37-dfaaed023103
| Item type | 紀要論文 / Departmental Bulletin Paper_02(1) | |||||||
|---|---|---|---|---|---|---|---|---|
| 公開日 | 2019-11-23 | |||||||
| タイトル | ||||||||
| タイトル | 農業生物のゲノム情報解析研究 | |||||||
| その他のタイトル | ||||||||
| その他のタイトル | 国産品種ダイズのゲノム配列解析とカイコゲノムデータベースの開発 | |||||||
| 言語 | ||||||||
| 言語 | jpn | |||||||
| キーワード | ||||||||
| 主題 | ダイズゲノム解析 | |||||||
| キーワード | ||||||||
| 主題 | soybean genome analysis | |||||||
| キーワード | ||||||||
| 主題 | エンレイ品種 | |||||||
| キーワード | ||||||||
| 主題 | cultivar Enrei | |||||||
| キーワード | ||||||||
| 主題 | 系統樹 | |||||||
| キーワード | ||||||||
| 主題 | phylogenetic tree | |||||||
| キーワード | ||||||||
| 主題 | アントシアニン・フラボノイド生合成系 | |||||||
| キーワード | ||||||||
| 主題 | anthocyanin and flavonoid biosynthesis | |||||||
| キーワード | ||||||||
| 主題 | カイコゲノムデータベース | |||||||
| キーワード | ||||||||
| 主題 | silkworm genome database KAIKObase | |||||||
| アクセス権 | ||||||||
| アクセス権 | metadata only access | |||||||
| アクセス権URI | http://purl.org/coar/access_right/c_14cb | |||||||
| 著者 |
下村, 道彦
× 下村, 道彦
|
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| 抄録 | ||||||||
| 内容記述タイプ | Abstract | |||||||
| 内容記述 | The genome information of agrobiological organisms has become an indispensable\ntool in both basic and applied researches. Soybean genomics information was analyzed to\ncreate genome information effective for breeding and improvement of specific traits, and to\nprovide information through a genome platform. An efficient genome platform to provide\nthe analyzed silkworm genome information was developed. In the case of soybean, although\na reference genome based on variety Williams 82 was available, it could not be used\nefficiently in the breeding and improvement of domestic varieties due to the differences in\nthe lineage with the domestic varieties. Accordingly, the genomic sequence of the domestic\nsoybean variety Enrei was analyzed and gene models were developed. As a result,\ndifferences in the gene models of Williams 82 and Enrei were clarified in terms of\nanthocyanin flavonoid biosynthesis system, phylogenetic analysis, mature seed proteins,\ncotyledons etc. The Enrei genome sequence data was integrated into DAIZUbase, a soybean\ngenome database. The database became available for soybean breeding etc. based on the\ngenome information. In the case of the silkworm genome, a platform for efficient utilization\nof large and diverse silkworm genomics information was constructed. The genome sequence,\ngenetic map information, expression sequence tag data, gene information, enhancer trap\nstrain information, and protein information were consolidated into the silkworm genome\ndatabase KAIKObase. A framework that enables collective browsing for linkage map and\nphysical map, scaffolds and contigs, BAC and fosmid ends, FPC, SNP markers and trait\nmarkers, genome annotation, gene models etc. with sequence and keyword function was\nconstructed. As a result, a genome infrastructure that integrates various genomics\ninformation was developed which could be used for improvement of sericulture and\ndevelopment of new pest control methods. | |||||||
| 書誌情報 | 発行日 2019-03-31 | |||||||
| ISSN | ||||||||
| 収録物識別子タイプ | ISSN | |||||||
| 収録物識別子 | 13438867 | |||||||
| 資源タイプ | ||||||||
| 内容記述タイプ | Other | |||||||
| 内容記述 | Thesis or Dissertation | |||||||
| 更新日 | ||||||||
| 日付 | 2019-11-24 | |||||||
| 日付タイプ | Created | |||||||
